STRuster

 STRuster results: 102015

 SCOP 1.71 classification
Class: All beta proteins
Fold: E2 regulatory, transactivation domain
Superfamily: E2 regulatory, transactivation domain
Family: E2 regulatory, transactivation domain
Protein: E2 regulatory, transactivation domain
Species: Human papillomavirus type 11
Species SCOP sunid: 102015

 Set description
Number of entries: 2
SCOP Entries: d1r6na_ d1r6ka_
Alignment File: 102015.alig
Aligned Sequences: 102015_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 102015_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(127, 127), (177, 177), (188, 195)]
Uniprot Nr [(128, 128), (178, 178), (189, 196)]

 Invariant Regions
Region1
Alignment Nr[(0, 126), (128, 176), (178, 187)]
Uniprot Nr[(1, 127), (129, 177), (179, 188)]
Superposition102015_superp_1.pdb.gz
Rasmol Script102015_superp_1.rsm
View in Jmol