STRuster

 STRuster results: 101994

 SCOP 1.71 classification
Class: All beta proteins
Fold: Double-stranded beta-helix
Superfamily: cAMP-binding domain-like
Family: cAMP-binding domain
Protein: HCN pacemaker channel
Species: Mouse (Mus musculus)
Species SCOP sunid: 101994

 Set description
Number of entries: 5
SCOP Entries: d1q43b_ d1q3eb_ d1q43a_ d1q5oa_ d1q3ea_
Alignment File: 101994.alig
Aligned Sequences: 101994_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101994_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(128, 132), (201, 209)]
Uniprot Nr [(566, 569), (635, 643)]

 Invariant Regions
Region1
Alignment Nr[(0, 127), (133, 200)]
Uniprot Nr[(443, 565), (570, 634)]
Superposition101994_superp_1.pdb.gz
Rasmol Script101994_superp_1.rsm
View in Jmol