STRuster

 STRuster results: 101611

 SCOP 1.71 classification
Class: All beta proteins
Fold: TNF-like
Superfamily: TNF-like
Family: TNF-like
Protein: Ectodysplasin A, Eda-a1
Species: Human (Homo sapiens)
Species SCOP sunid: 101611

 Set description
Number of entries: 18
SCOP Entries: d1rj7h_ d1rj8f_ d1rj7m_ d1rj7e_ d1rj7j_ d1rj7b_ d1rj8b_ d1rj8g_ d1rj7g_ d1rj7l_ d1rj7d_ d1rj7i_ d1rj8a_ d1rj7a_ d1rj8d_ d1rj7f_ d1rj7k_ d1rj8e_
Alignment File: 101611.alig
Aligned Sequences: 101611_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101611_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(14, 36), (68, 73), (93, 99), (147, 149)]
Uniprot Nr [(256, 278), (310, 315), (335, 341), (389, 391)]

 Invariant Regions
Region1
Alignment Nr[(0, 13), (37, 67), (74, 92), (100, 146)]
Uniprot Nr[(242, 255), (279, 309), (316, 334), (342, 388)]
Superposition101611_superp_1.pdb.gz
Rasmol Script101611_superp_1.rsm
View in Jmol