| STRuster results: 101570 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Nucleoplasmin-like/VP (viral coat and capsid proteins) |
| Superfamily: | Positive stranded ssRNA viruses |
| Family: | Tetraviridae-like VP |
| Protein: | Tetraomegavirus capsid protein |
| Species: | Nudaurelia capensis omega virus |
| Species SCOP sunid: | 101570 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1ohfd_ d1ohfa_ d1ohfb_ d1ohfc_ |
| Alignment File: | 101570.alig |
| Aligned Sequences: | 101570_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 101570_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 13), (28, 41), (95, 104), (183, 187), (278, 290), (544, 549), (571, 575)] |
| Uniprot Nr | [(42, 55), (70, 83), (137, 146), (225, 229), (320, 332), (586, 591), (613, 617)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(42, 94), (105, 182), (188, 277), (291, 543), (576, 599)] |
| Uniprot Nr | [(84, 136), (147, 224), (230, 319), (333, 585), (618, 641)] |
| Superposition | 101570_superp_1.pdb.gz |
| Rasmol Script | 101570_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(550, 570), (576, 599)] |
| Uniprot Nr | [(592, 612), (618, 641)] |
| Superposition | - |
