| STRuster results: 101516 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Immunoglobulin-like beta-sandwich |
| Superfamily: | Immunoglobulin |
| Family: | I set domains |
| Protein: | Semaphorin 4d Ig-like domain |
| Species: | Human (Homo sapiens) |
| Species SCOP sunid: | 101516 |
| Set description |
| Number of entries: | 2 |
| SCOP Entries: | d1olzb1 d1olza1 |
| Alignment File: | 101516.alig |
| Aligned Sequences: | 101516_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 101516_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 1), (18, 19), (46, 47), (72, 73), (89, 90)] |
| Uniprot Nr | [(558, 559), (576, 577), (604, 605), (630, 631), (647, 648)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(2, 17), (20, 45), (48, 71), (74, 88)] |
| Uniprot Nr | [(560, 575), (578, 603), (606, 629), (632, 646)] |
| Superposition | 101516_superp_1.pdb.gz |
| Rasmol Script | 101516_superp_1.rsm |
| View in Jmol | |
