STRuster

 STRuster results: 101503

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Multiheme cytochromes
Superfamily: Multiheme cytochromes
Family: Di-heme elbow motif
Protein: Periplasmic nitrate reductase subunit NapB
Species: Rhodobacter sphaeroides
Species SCOP sunid: 101503

 Set description
Number of entries: 8
SCOP Entries: d1ogyn_ d1ogyp_ d1ogyh_ d1ogyj_ d1ogyf_ d1ogyb_ d1ogyl_ d1ogyd_
Alignment File: 101503.alig
Aligned Sequences: 101503_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101503_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(12, 15), (43, 46), (107, 108)]
Uniprot Nr [(38, 41), (69, 72), (133, 134)]

 Invariant Regions
Region1
Alignment Nr[(16, 42), (47, 106), (109, 125)]
Uniprot Nr[(42, 68), (73, 132), (135, 151)]
Superposition101503_superp_1.pdb.gz
Rasmol Script101503_superp_1.rsm
View in Jmol