STRuster

 STRuster results: 101432

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Family: Nuclear receptor ligand-binding domain
Protein: Vitamin D nuclear receptor
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 101432

 Set description
Number of entries: 4
SCOP Entries: d1rkga_ d1rk3a_ d1rjka_ d1rkha_
Alignment File: 101432.alig
Aligned Sequences: 101432_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101432_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(296, 299)]
Uniprot Nr [(419, 422)]

 Invariant Regions
Region1
Alignment Nr[(0, 295)]
Uniprot Nr[(123, 418)]
Superposition101432_superp_1.pdb.gz
Rasmol Script101432_superp_1.rsm
View in Jmol