STRuster

 STRuster results: 101189

 SCOP 1.71 classification
Class: All alpha proteins
Fold: EF Hand-like
Superfamily: Insect pheromone/odorant-binding proteins
Family: Insect pheromone/odorant-binding proteins
Protein: Pheromone binding protein PBPLma
Species: Madeira cockroach (Leucophaea maderae)
Species SCOP sunid: 101189

 Set description
Number of entries: 6
SCOP Entries: d1orga_ d1p28a_ d1ow4a_ d1ow4b_ d1orgb_ d1p28b_
Alignment File: 101189.alig
Aligned Sequences: 101189_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101189_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (83, 85), (101, 102), (118, 119)]
Uniprot Nr [(18, 20), (101, 103), (119, 120), (136, 137)]

 Invariant Regions
Region1
Alignment Nr[(3, 82), (86, 100), (103, 117)]
Uniprot Nr[(21, 100), (104, 118), (121, 135)]
Superposition101189_superp_1.pdb.gz
Rasmol Script101189_superp_1.rsm
View in Jmol