STRuster

 STRuster results: 101172

 SCOP 1.71 classification
Class: All alpha proteins
Fold: HLH-like
Superfamily: HLH, helix-loop-helix DNA-binding domain
Family: HLH, helix-loop-helix DNA-binding domain
Protein: SREBP-2
Species: Human (Homo sapiens)
Species SCOP sunid: 101172

 Set description
Number of entries: 4
SCOP Entries: d1uklf_ d1ukle_ d1uklc_ d1ukld_
Alignment File: 101172.alig
Aligned Sequences: 101172_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 101172_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (17, 20), (57, 63)]
Uniprot Nr [(343, 349), (359, 362), (397, 403)]

 Invariant Regions
Region1
Alignment Nr[(7, 16), (21, 56)]
Uniprot Nr[(350, 358), (363, 396)]
Superposition101172_superp_1.pdb.gz
Rasmol Script101172_superp_1.rsm
View in Jmol