STRuster

 STRuster results: 101122

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Four-helical up-and-down bundle
Superfamily: Domain of the SRP/SRP receptor G-proteins
Family: Domain of the SRP/SRP receptor G-proteins
Protein: Signal recognition particle receptor, FtsY
Species: Thermus aquaticus
Species SCOP sunid: 101122

 Set description
Number of entries: 2
SCOP Entries: d1rj9a1 d1okkd1
Alignment File: 101122.alig
Aligned Sequences: 101122_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 101122_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(39, 40)]
Uniprot Nr [(59, 60)]

 Invariant Regions
Region1
Alignment Nr[(0, 38), (41, 74)]
Uniprot Nr[(20, 58), (61, 94)]
Superposition101122_superp_1.pdb.gz
Rasmol Script101122_superp_1.rsm
View in Jmol