| STRuster results: 101047 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | "Winged helix" DNA-binding domain |
| Family: | 39 kda initiator binding protein, IBP39, N-terminal domain |
| Protein: | 39 kda initiator binding protein, IBP39, N-terminal domain |
| Species: | Trichomonas vaginalis |
| Species SCOP sunid: | 101047 |
| Set description |
| Number of entries: | 7 |
| SCOP Entries: | d1pp8p_ d1pp8o_ d1pp8f_ d1pp8v_ d1pp8m_ d1pp8u_ d1pp7u_ |
| Alignment File: | 101047.alig |
| Aligned Sequences: | 101047_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 101047_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 4), (22, 23), (51, 52), (95, 117)] |
| Uniprot Nr | [(1, 5), (23, 24), (52, 53), (96, 118)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(5, 21), (24, 50), (53, 94)] |
| Uniprot Nr | [(6, 22), (25, 51), (54, 95)] |
| Superposition | 101047_superp_1.pdb.gz |
| Rasmol Script | 101047_superp_1.rsm |
| View in Jmol | |
