STRuster

 STRuster results: 100947

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: The "swivelling" beta/beta/alpha domain
Superfamily: GroEL apical domain-like
Family: Group II chaperonin (CCT, TRIC), apical domain
Protein: Thermosome, A-domain
Species: Archaeon Thermoplasma acidophilum, beta chain
Species SCOP sunid: 100947

 Set description
Number of entries: 3
SCOP Entries: d1a6eb2 d1e0rb_ d1a6db2
Alignment File: 100947.alig
Aligned Sequences: 100947_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 100947_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (29, 57), (82, 82), (120, 123), (139, 153)]
Uniprot Nr [(214, 217), (243, 271), (296, 296), (334, 337), (353, 367)]

 Invariant Regions
Region1
Alignment Nr[(4, 28), (58, 81), (83, 119), (124, 138)]
Uniprot Nr[(218, 242), (272, 295), (297, 333), (338, 352)]
Superposition100947_superp_1.pdb.gz
Rasmol Script100947_superp_1.rsm
View in Jmol