STRuster

 STRuster results: 100893

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: DNA/RNA polymerases
Superfamily: DNA/RNA polymerases
Family: Lesion bypass DNA polymerase (Y-family), catalytic domain
Protein: DNA polymerase eta
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 100893

 Set description
Number of entries: 2
SCOP Entries: d1jiha2 d1jihb2
Alignment File: 100893.alig
Aligned Sequences: 100893_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 100893_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(46, 47), (98, 99), (311, 324), (350, 360), (387, 388)]
Uniprot Nr [(47, 48), (99, 100), (312, 325), (351, 361), (388, 389)]

 Invariant Regions
Region1
Alignment Nr[(0, 45), (100, 310), (325, 349), (361, 386)]
Uniprot Nr[(1, 46), (101, 311), (326, 350), (362, 387)]
Superposition100893_superp_1.pdb.gz
Rasmol Script100893_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 45), (48, 97), (100, 310)]
Uniprot Nr[(1, 46), (49, 98), (101, 311)]
Superposition100893_superp_2.pdb.gz
Rasmol Script100893_superp_2.rsm
View in Jmol